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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs515246 chr6:11603037 A/G ZNF326 chr1:90460671-90501090:+ -0.22 -6.13 1.83E-9 Box Plot
THCA rs522483 chr8:9812969 C/G SGK223 chr8:8175258-8244008:- 0.38 7.19 2.5E-12 Box Plot
THCA rs525726 chr8:9887797 G/C SGK223 chr8:8175258-8244008:- 0.37 7.22 2.07E-12 Box Plot
THCA rs527170 chr5:49518189 T/A LOC647121 chr1:121260910-121313686:+ -0.36 -7.69 8.2E-14 Box Plot
THCA rs529607 chr6:92393990 C/T TCF4 chr18:52889562-53332018:- 0.16 5.94 5.42E-9 Box Plot
THCA rs534523 chr8:9884999 C/G SGK223 chr8:8175258-8244008:- 0.37 7.32 1.04E-12 Box Plot
THCA rs537811 chr11:77468088 C/A INTS4L1 chr7:64601603-64694600:+ 0.62 10.07 9.2E-22 Box Plot
THCA rs538628 chr17:44787313 G/C C17orf69 chr17:43716341-43723594:+ 0.53 11.54 2.35E-27 Box Plot
THCA rs538628 chr17:44787313 G/C LOC644172 chr17:43677491-43679748:- 1.11 18.26 6.63E-57 Box Plot
THCA rs538628 chr17:44787313 G/C LRRC37A4 chr17:43578685-43595516:- -0.74 -17.93 2.28E-55 Box Plot
THCA rs538628 chr17:44787313 G/C MGC57346 chr17:43697712-43715327:+ 0.56 10.61 9.06E-24 Box Plot
THCA rs538628 chr17:44787313 G/C PLEKHM1 chr17:43513266-43568115:- 0.35 6.8 3.17E-11 Box Plot
THCA rs547812 chr1:65528177 C/T ZCCHC6 chr9:88902648-88969369:- 0.32 6.02 3.38E-9 Box Plot
THCA rs555200 chr8:9888729 A/G SGK223 chr8:8175258-8244008:- 0.37 7.21 2.21E-12 Box Plot
THCA rs555458 chr5:49558606 C/T LOC647121 chr1:121260910-121313686:+ -0.36 -7.64 1.16E-13 Box Plot